Wildlife

The magic in the mud: sandpipers’ migration superfood

An invisible fuel draws thousands of tiny migrating shorebirds to the Roberts Bank Mudflats each year. Now, we’re in danger of losing it forever. 

  • Feb 21, 2025
  • 3,130 words
  • 13 minutes
Western sandpipers feeding in spring at Roberts Bank near the Port of Vancouver.
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It’s sunrise in mid-April on the edge of the mudflats. Armed with a spotting scope, an intensely focused man is scanning, counting. He visits the same place almost every day at this time of the year, guided by tide tables.

To most, the intertidal mudflats of Roberts Bank look like a vast, flat, barren expanse of mud. About 35 kilometres south of downtown Vancouver, the raw, rarely visited landscape would feel almost completely isolated, if not for the rail yards and the Port of Vancouver bordering the mudflats on the horizon.

“When I come out here, my goal is to survey the flocks that are using the whole mudflat. But I will zoom in every now and then on one specific bird and just watch that individual and think that this bird is now going to fly up to the Arctic and find a nest site,” says Flemming, who works with the Canadian Wildlife Service of Environment and Climate Change Canada. 

Western sandpipers migrate thousands of kilometres north along the Pacific coast from their overwintering areas as far south as Peru to their breeding grounds in Alaska. These shorebirds, weighing no more than 35 grams, stop at just a handful of places along the North American Pacific Flyway to refuel. Roberts Bank is one of these stopover sites, on the Fraser River estuary in British Columbia. A top biodiversity hotspot in Canada, it’s globally classified as an Important Bird Area.

 

Fall migration of western sandpipers at Roberts Bank near the Port of Vancouver.
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But in 2023, the future of the mudflats was thrown into question. Despite years of protest from scientists, conservationists and community groups, the federal government conditionally approved a proposal by the Vancouver Fraser Port Authority to build a second container ship terminal at Roberts Bank, expand the existing road and rail causeway to the Deltaport and Westshore terminals and scoop out a deeper tug boat terminal to handle the additional shipping traffic. The added 2.4 million twenty-foot equivalent units of containers per year will nearly double the port’s container capacity. On top of that, construction of the terminal would require filling in 177 hectares of intertidal mudflats at Roberts Bank, and Environment and Climate Change Canada has predicted the expansion will indirectly affect up to 558 hectares of mudflats — a habitat vital for the survival of not only sandpipers but Pacific dunlin, Pacific salmon and southern resident orcas as well.

If the Roberts Bank mudflats are disrupted to the level scientists fear, it’s unlikely many of these diminutive shorebirds will fulfil their Arctic destiny. Between 42 and 64 per cent of the entire species relies on Roberts Bank to rest and refuel, and it’s estimated that almost every western sandpiper will use the site at least once in its lifespan.

A further question lingers: why here? While the sandpipers undoubtedly need a rest stop on their northern odyssey, they have thousands of kilometres of coastline to choose from — and other mudflats, too. Perhaps there is more to this vast, brown wasteland than meets the eye?

Map: Chris Brackley/Can Geo; Copernicus sentinel imagery; Aug. 2024. Western sandpiper range: IUCN Red List, 2024. Intertidal zones and biofilm areas: Hakai Magazine, 2016; Harrison et al, Environment Canada, 1998; Schnurr et al., Frontiers in Marine Science, 2020
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At the migration’s peak in late April, Flemming counts around 120,000 to 150,000 western sandpipers in a day. “It’s quite busy when you’re trying to count them. You’ve got to move fast,” says Mark Drever, a research scientist with Environment and Climate Change Canada who is also involved in the surveys. “One day, you come back to do your count, and they are not here anymore. I always wish them well in these long flights and tell them ‘Good luck, little buddies.’”

By mid-May, the sandpipers have all left to their next major stopover, the Stikine River estuary in southwest Alaska, more than 850 kilometres away. Roberts Bank is one of the best and last major stopover spots on the Pacific Flyway because, on the way north, there aren’t many large estuaries. A study of radio-tagged western sandpipers showed that, on average, it took 7.7 days for the birds
to travel 3,250 kilometres between San Francisco Bay — one of their major stopover sites — and the Copper River delta in Alaska, the last stop before the breeding grounds. One bird flew the distance in less than 42 hours, or about 1,850 kilometres per day. 

Western sandpipers at Roberts Bank in the mud layer where the species finds biofilm.
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For a long time, scientists assumed without debate that the sandpipers stopped at Roberts Bank to refuel on worms and other small marine invertebrates. That changed when, more than 30 years ago, a mud aficionado with an inquisitive streak began to closely observe western sandpipers while they were feeding. 

Robert Elner grew up by the sea in England, developed an interest in marine biology as a child and pursued a PhD in crab feeding behaviour. It was their similarity to crabs that first drew him to sandpipers. “It immediately struck me that they looked like crabs scurrying up and down the mudflat,” says Elner, now a scientist emeritus with Environment and Climate Change Canada and adjunct professor at Simon Fraser University.

The fact that there were so many birds in what looked like a desolate wasteland intrigued Elner. “How many people go out onto a mudflat for a recreational stroll in the evening? It’s smelly, you get stuck, you fall over. It’s nothing like walking in a tropical forest or a rocky seashore.”

To tackle this enigma, Elner ventured out on the mud. “Learning to walk on mud was almost an acrobatic experience,” he recalls, with the lingering excitement of a pioneer that stepped on faraway land. 

“These flights can be likened to a trip to the
moon.”

Even though mudflats are one of Earth’s oldest and largest coastal ecosystems, few have studied them, largely because they are difficult to work in. “Mud is almost unknowable. If it was a rocky shore, we could walk out there, pick up mussels and dig clams. But here we have something that is deep and complex,” Elner explains. “It’s like being an explorer: you are finding life in a wasteland.”

Following Elner as he effortlessly navigates the mud with his hip boots feels worthy of an Olympic discipline. The terrain is uneven, unpredictable, deceptive, hard in some spots and soft in others, always challenging. Meanwhile, Elner displays a sense of excitement unabated in the last 30 years. “Here, we are surrounded by 70,000 western sandpipers. You are joining these birds in this intense migration. You are stepping into their universe,” he says. “It’s powerful. It is a natural drug. That thrill never leaves you.”

Robert Elner reveals the mud layer where sandpipers find biofilm at Roberts Bank.
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With a spatula, Elner scrapes the surface and reveals black, sulphur-smelling mud. “It’s black because there is no oxygen. There is not much that can live in that.”

Elner notes the absence of the invertebrates that the sandpipers were reputed to be eating. Yet the birds are constantly pecking at the mud surface. They seem to be voraciously feeding on… nothing?

In the mid-1990s, Elner examined the stomachs of a few dead sandpipers. He found only sand particles and liquid. Curious, he shipped a few frozen sandpiper heads to a colleague in Nantes, France, who had a powerful electron microscope to more closely examine the birds’ bills and mouthparts. It turned out that the sandpipers have unusually hairy tongues, and the electron micrographs also revealed microcosmic plants called diatoms on the long, fine bristles of the birds’ tongues. “That was the eureka moment,” Elner says. 

When he realized that their tongues were like specialized toothbrushs, he knew they would offer no real advantage in feeding on invertebrates; instead, the sandpipers were using their tongues to scrape biofilm off the surface of the mud. It was biofilm — a thin, sticky layer of microbes, organic matter and sediment bound together by diatom-and bacteria-secreted mucus — that was somehow fuelling the birds on their epic adventures. Until then, the only creatures that were known to eat biofilm were marine invertebrates and fish. 

A western sandpiper feeds in the mud layer at Roberts Bank where biofilm is found.
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Elner and his colleagues figured out that the sandpipers use the biofilm as a special energy drink to power their extreme migration, just like marathon runners. The birds were not loading up on just any mud slime but specifically targeting biofilm containing a high concentration of omega-3 fatty acids, generated by the diatoms.

Those high-nutrient fatty acids — especially two called eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) — offer many benefits to the birds, boosting their immunity and reducing inflammation. These essential nutrients also tweak the birds’ flight muscles, transforming them into endurance muscles that can get them to Alaska with enough energy left over to breed. “It enables the birds to be better flyers and to be more efficient on their migration,” explains Patricia Baird, a seabird ecologist who discovered the unique role of diatoms in the production of omega-3 fatty acids. 

Experiments with flying western sandpipers in a wind tunnel showed that birds fed food rich in fatty acids increased their flying efficiency by about 12 per cent. “These flights can be likened to a trip to the moon. You need enough fuel and life support to get there,” says Christopher Guglielmo, a biologist who ran the experiments in the wind tunnel at Western University’s Advanced Facility for Avian Research. “If you think of shorebirds as little rocket ships, they have to budget everything out along the whole trip to make it successfully.”

“Mud is almost unknowable.”

The sandpipers are so dependent on the biofilm at Roberts Bank that it accounts for 45 to 59 per cent of the mass in their diet and half their daily energy budget. Without it, many birds would not make it to their final destination, as the nutrients cannot be obtained from any other available food. “It’s the magic carpet that enables them to fly,” says Elner.

Since the first observations of biofilm grazing by western sandpipers, it’s been found that biofilm feeds at least 21 other species of shorebirds at estuarine stopover sites. Perhaps more importantly, the story of western sandpipers at Roberts Bank has shed a new light on the ecological value of a largely misunderstood ecosystem.

A murmuration of western sandpipers swoops over Roberts Bank.
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Compared with more charismatic habitat types like eelgrass or salt-marsh, western science generally sees intertidal mud as a purposeless wasteland. Globally, mudflat ecosystems decreased 16 per cent in certain areas between 1984 and 2016, largely due to degradation from coastal development, pollution and disturbances from marine traffic.

Meanwhile, a study of 28 shorebird species in North America revealed that between 1980 and 2019, more than half of the surveyed species lost more than half of their populations. Jim Johnson, a biologist who studies migratory shorebird species in Alaska’s breeding grounds, says habitat loss is a driving force in shorebird declines. “The most devastating part of these declines is what’s happening in the non-breeding areas where these birds are migrating and wintering.” 

Linking the global loss of critical mudflats and the demise of migrating shorebirds is a logical connection to make, and possibly a sign of wider issues to come. “Birds are great harbingers of what’s happening in systems,” Elner says. At Roberts Bank, the fatty acids produced in mudflats are also important to invertebrates, salmon and the endangered southern resident orcas that depend on them and, ultimately, human health. “The birds have told us this, and if they had not been there, no one would have figured out that biofilm production is critical.”

It’s therefore ironic that as scientists are learning about the global importance of mudflats, the site where it all began is now threatened by the port development. Proponents of the project, however, downplay adverse effects — and point to the huge economic potential of the development. Alex Munro, senior communications advisor, issues management and media relations at the Vancouver Fraser Port Authority, said in a written statement to Canadian Geographic that the project will deliver critical capacity and resilience to support Canada’s trade needs. He said it will create tens of thousands of supply chain jobs, support an estimated $100 billion in Canadian trade per year, and deliver hundreds of millions of dollars in tax revenues and billions of dollars in Canadian GDP during operation. At a time when Canada’s economy is struggling, many see the benefits as enticing — especially when, according to Munro’s statement, the project is advancing “in a way that protects the environment,” and is “not expected to have adverse effects on biofilm and western sandpipers.” 

“Biofilm is the magic carpet that enables them to fly.”

But not everybody agrees. A coalition of environmental groups in British Columbia has filed an application for a judicial review in the Federal Court, challenging the federal government’s decision to approve the Roberts Bank Terminal 2 Project and arguing it is contrary to the Species at Risk Act.

And, in a review of the project, Environment and Climate Change Canada found that in addition to the direct loss of mudflats, the impacts on biofilm would be permanent, irreversible and unmitigable, with species-level consequences for western sandpipers. There would also be no way to recreate the rich biofilm habitat. 

This is because the invisible processes at work in the mudflats of Roberts Bank are influenced by complex physical and chemical interactions. Spring is a time of rapid change over the mudflats, with more sunlight, rising temperatures and lowest tides that occur during daylight hours. Photosynthetic activity increases and diatoms grow rapidly. At the same time, the Fraser River’s pulse of fresh water from the snowmelt-fuelled spring freshet changes the salinity of the mud, causing a stress response

in the diatoms that stimulate them to produce omega-3 fatty acids, the birds’ superfood. The freshwater “shocks the diatoms,” Elner says. The magic in this delicate natural cycle is this is all perfectly timed with the arrival of the western sandpipers on their spring migration.

A droplet of diatom-rich biofilm hangs from the beak of a sandpiper.
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But this magic does not happen everywhere. “Not all mudflats are the same. Some are heavily used by birds and others are not,” Drever says.

Drever and his team found that abundances of western sandpipers and dunlin were up to 100 times higher at Brunswick Point on Roberts Bank than at another mudflat at Iona Beach, which is next to the Vancouver International Airport and a sewage treatment plant and has two jetties. Nutrient content in intertidal biofilm was also measured to be 1.4 to 3.8 times higher. Artificial structures like the jetties and causeways near Iona were found to disrupt freshwater flow and the availability of biofilm.

“Those mudflats are still mudflats, but they donʼt provide the biofilm that the birds need to refuel,” Elner says. This makes Roberts Bank the sole remaining large bank in the Fraser River estuary where these natural conditions are still intact.

This explains why the port expansion project is so concerning. It is predicted that the development will restrain the Fraser River’s outflow and remove the salinity trigger for high fatty acid production by diatoms. The sandpipers would lose access to the essential nutrients from the biofilm and likely become endangered within 30 years, with cascading effects on the entire ecosystem.

With the loss of Roberts Bank in the chain of migratory stopover sites, the sandpipers would need to fly at least an additional 250 kilometres from the Grays Harbor stopover in Washington state directly to the Stikine River Estuary in Alaska, a distance of about 1,200 kilometres. “It is like taking a rung out of the ladder,” Elner says. “Fewer and fewer birds are going to make it.”

A murmuration of western sandpipers flying in the sunset.
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Like other shorebirds, western sandpipers are already in trouble due to climate change and habitat loss and degradation. The Canadian Wildlife Service’s spring shorebird survey conducted by Flemming at Roberts Bank has shown that over the last 30 years, the number of western sandpipers using the stopover site has declined by 54 per cent and counting. “It’s telling us how much our environment is changing,” Flemming says.

The port expansion is not yet a certainty, though, and the federal government has subjected the project to 370 legally binding conditions to protect the environment, wildlife and land use activities of Coast Salish First Nations.

Some First Nations governments are against the project while others are provisionally for it. Tsawwassen First Nation, separated from the port by a few short kilometres of mudflats and water, signed a relationship agreement with the Vancouver Fraser Port Authority in 2021. In June 2023, sxwamisaat (Chief Laura Cassidy) said the Nation has provided consent for the project but is not advocating for it.

A sandpiper at the breeding grounds in Nome, Alaska.
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But for Steven Stark, Tsawwassen First Nation band member and crab fisherman, the Tsawwassen way of life is “just not going to be the same.”

“I still have unanswered questions about health concerns, noise pollution, air pollution, light pollution, which are all going to affect the migrating birds that come in and out of the region. Where do they go and where do the crabbers go?”

Among the 370 conditions, the Port of Vancouver is required to monitor the impact of port activities on biofilm over a minimum of three years through the appointment of an independent committee of scientists. If the biofilm is found to be compromised, the federal government will require the port to enact measures that could include the redesign or removal of the infrastructure.

Amid this ongoing David and Goliath drama of microscopic diatoms, tiny shorebirds and a mega-port development, Elner, Baird and colleagues are working to further build the case for protecting the sandpipers’ critical food source. “Science has got a very limited time to bring home the answers,” Elner says. Their research includes experiments to understand if the shorebirds locate nutritious patches of biofilm on Roberts Bank by smell. For Baird, not enough is known to let the mudflats be developed. “Why risk it?” she says. “If you don’t preserve Roberts Bank, it’s gone. You can’t bring it back.” 

Biologist Scott Flemming helps with a Canadian Wildlife Service survey at Roberts Banks that began in 1991 to monitor trends in bird populations.
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On the birds’ breeding grounds in Alaska, Johnson is collecting sandpiper eggs as part of a study on whether the fatty acids they ingest at stopover mudflats play a role in chick growth. Proving that biofilm is also an essential component of the birds’ ability to reproduce will heighten the importance of conserving sites like Roberts Bank, he says.

Meanwhile, Elner continues to visit Roberts Bank every spring, on a constant mission to convert visitors to the magic he finds in the mud. He evokes The Secret Garden, Frances Hodgson Burnett’s 1911 children’s novel in which a young girl discovers a garden locked up in the grounds of her uncle’s manor in the Yorkshire countryside. The garden becomes a catalyst for healing the characters in the book. The story resonates with Elner — the mud his secret garden, the sandpipers its fleeting visitors. “It’s brilliant, it’s productive, and it’s beautiful,” he says. “Everybody I have taken here, they really start to smile.”

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